mod_storage_container
Lines: 181 |
Visibility: private
Contains an object for storing a fixed number of integer and real values.
author: Alexander Knoll
Dependencies
Uses
module~~mod_storage_container~~UsesGraph
module~mod_storage_container
mod_storage_container
mod_property_list
mod_property_list
module~mod_storage_container->mod_property_list
module~mod_abstract_property_list
mod_abstract_property_list
module~mod_storage_container->module~mod_abstract_property_list
module~mod_dynamic_int_array
mod_dynamic_int_array
module~mod_storage_container->module~mod_dynamic_int_array
module~mod_io
mod_io
module~mod_storage_container->module~mod_io
module~mod_mpi
mod_mpi
module~mod_storage_container->module~mod_mpi
module~mod_sort
mod_sort
module~mod_storage_container->module~mod_sort
module~mod_string
mod_string
module~mod_storage_container->module~mod_string
module~mod_abstract_property_list->module~mod_dynamic_int_array
module~mod_abstract_property_list->module~mod_mpi
module~mod_abstract_property_list->module~mod_string
module~mod_dynamic_int_array_2d
mod_dynamic_int_array_2d
module~mod_abstract_property_list->module~mod_dynamic_int_array_2d
module~mod_dynamic_string_array
mod_dynamic_string_array
module~mod_abstract_property_list->module~mod_dynamic_string_array
module~mod_optional_args
mod_optional_args
module~mod_abstract_property_list->module~mod_optional_args
module~mod_throw
mod_throw
module~mod_abstract_property_list->module~mod_throw
iso_fortran_env
iso_fortran_env
module~mod_io->iso_fortran_env
module~mod_io->module~mod_optional_args
module~mod_precision
mod_precision
module~mod_io->module~mod_precision
module~mod_mpi->module~mod_precision
mpi_f08
mpi_f08
module~mod_mpi->mpi_f08
module~mod_sort->module~mod_precision
module~mod_string->module~mod_precision
module~mod_dynamic_int_array_2d->module~mod_mpi
module~mod_dynamic_string_array->module~mod_string
module~mod_precision->iso_fortran_env
iso_c_binding
iso_c_binding
module~mod_precision->iso_c_binding
module~mod_throw->module~mod_io
module~mod_throw->module~mod_mpi
module~mod_throw->module~mod_sort
module~mod_throw->iso_fortran_env
module~mod_throw->module~mod_precision
module~mod_throw->iso_c_binding
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modules which it uses.
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Used By
module~~mod_storage_container~~UsedByGraph
module~mod_storage_container
mod_storage_container
module~mod_dataset_storage
mod_dataset_storage
module~mod_dataset_storage->module~mod_storage_container
module~mod_sum_out
mod_sum_out
module~mod_sum_out->module~mod_storage_container
module~mod_abstract_structure_data_file
mod_abstract_structure_data_file
module~mod_abstract_structure_data_file->module~mod_dataset_storage
module~mod_cost_calculator
mod_cost_calculator
module~mod_cost_calculator->module~mod_dataset_storage
module~mod_cost_epoch
mod_cost_epoch
module~mod_cost_calculator->module~mod_cost_epoch
module~mod_write_outfiles_training
mod_write_outfiles_training
module~mod_cost_calculator->module~mod_write_outfiles_training
module~mod_dataloader_file
mod_dataloader_file
module~mod_cost_calculator->module~mod_dataloader_file
module~mod_cost_epoch->module~mod_dataset_storage
module~mod_dataset_statistics
mod_dataset_statistics
module~mod_dataset_statistics->module~mod_dataset_storage
module~mod_dataset_statistics->module~mod_dataloader_file
module~mod_initialize
mod_initialize
module~mod_initialize->module~mod_dataset_storage
module~mod_two_body
mod_two_body
module~mod_initialize->module~mod_two_body
module~mod_output_files_and_cost
mod_output_files_and_cost
module~mod_output_files_and_cost->module~mod_dataset_storage
module~mod_output_files_and_cost->module~mod_cost_calculator
module~mod_predict_multiple_structures
mod_predict_multiple_structures
module~mod_output_files_and_cost->module~mod_predict_multiple_structures
module~mod_output_files_and_cost->module~mod_dataloader_file
module~mod_output_files_and_cost_4g_charges
mod_output_files_and_cost_4g_charges
module~mod_output_files_and_cost_4g_charges->module~mod_dataset_storage
module~mod_output_files_and_cost_4g_charges->module~mod_cost_calculator
module~mod_predict_4g_charges_training_qeq_multiple_structures
mod_predict_4g_charges_training_qeq_multiple_structures
module~mod_output_files_and_cost_4g_charges->module~mod_predict_4g_charges_training_qeq_multiple_structures
module~mod_output_files_and_cost_4g_charges->module~mod_dataloader_file
module~mod_output_files_and_cost_4g_short_range
mod_output_files_and_cost_4g_short_range
module~mod_output_files_and_cost_4g_short_range->module~mod_dataset_storage
module~mod_output_files_and_cost_4g_short_range->module~mod_cost_calculator
module~mod_predict_4g_short_range_training_qeq_multiple_structures
mod_predict_4g_short_range_training_qeq_multiple_structures
module~mod_output_files_and_cost_4g_short_range->module~mod_predict_4g_short_range_training_qeq_multiple_structures
module~mod_predict_qeq_feature_calculator_multiple_structures
mod_predict_qeq_feature_calculator_multiple_structures
module~mod_output_files_and_cost_4g_short_range->module~mod_predict_qeq_feature_calculator_multiple_structures
module~mod_output_files_and_cost_4g_short_range->module~mod_dataloader_file
module~mod_post_processing_wrapper_single_structure
mod_post_processing_wrapper_single_structure
module~mod_post_processing_wrapper_single_structure->module~mod_dataset_storage
module~mod_store_atomic_property_single_structure
mod_store_atomic_property_single_structure
module~mod_post_processing_wrapper_single_structure->module~mod_store_atomic_property_single_structure
module~mod_post_processing_wrapper_single_structure->module~mod_two_body
module~mod_predict_4g_charges_training_qeq_multiple_structures->module~mod_dataset_storage
module~mod_predict_4g_short_range_training_qeq_multiple_structures->module~mod_dataset_storage
module~mod_predict_all_chunks
mod_predict_all_chunks
module~mod_predict_all_chunks->module~mod_dataset_storage
module~mod_predict_all_chunks->module~mod_predict_multiple_structures
module~mod_predict_all_chunks->module~mod_two_body
module~mod_predict_all_chunks->module~mod_dataloader_file
module~mod_predict_mode
mod_predict_mode
module~mod_predict_mode->module~mod_dataset_storage
module~mod_predict_mode->module~mod_initialize
module~mod_predict_mode->module~mod_predict_multiple_structures
module~mod_predict_mode->module~mod_two_body
module~mod_write_outfiles
mod_write_outfiles
module~mod_predict_mode->module~mod_write_outfiles
module~mod_predict_mode->module~mod_dataloader_file
module~mod_predict_multiple_structures->module~mod_dataset_storage
module~mod_predict_multiple_structures->module~mod_post_processing_wrapper_single_structure
module~mod_predict_multiple_structures->module~mod_store_atomic_property_single_structure
module~mod_predict_multiple_structures->module~mod_two_body
module~mod_predict_qeq_feature_calculator_multiple_structures->module~mod_dataset_storage
module~mod_predict_qeq_feature_calculator_multiple_structures->module~mod_dataloader_file
module~mod_store_atomic_property_single_structure->module~mod_dataset_storage
module~mod_train_energy_multiple_structures
mod_train_energy_multiple_structures
module~mod_train_energy_multiple_structures->module~mod_dataset_storage
module~mod_train_energy_multiple_structures->module~mod_initialize
module~mod_train_forces_multiple_structures
mod_train_forces_multiple_structures
module~mod_train_forces_multiple_structures->module~mod_dataset_storage
module~mod_train_forces_multiple_structures->module~mod_initialize
module~mod_train_forces_multiple_structures->module~mod_train_energy_multiple_structures
module~mod_train_loop_4g_charges
mod_train_loop_4g_charges
module~mod_train_loop_4g_charges->module~mod_dataset_storage
module~mod_train_loop_4g_charges->module~mod_cost_calculator
module~mod_train_loop_4g_charges->module~mod_cost_epoch
module~mod_train_loop_4g_charges->module~mod_initialize
module~mod_train_loop_4g_charges->module~mod_output_files_and_cost_4g_charges
module~mod_train_loop_4g_charges->module~mod_dataloader_file
module~mod_train_4g_atomic_charges_structure_batch
mod_train_4g_atomic_charges_structure_batch
module~mod_train_loop_4g_charges->module~mod_train_4g_atomic_charges_structure_batch
module~mod_train_loop_atomic_property
mod_train_loop_atomic_property
module~mod_train_loop_atomic_property->module~mod_dataset_storage
module~mod_train_loop_atomic_property->module~mod_cost_calculator
module~mod_train_loop_atomic_property->module~mod_cost_epoch
module~mod_train_loop_atomic_property->module~mod_initialize
module~mod_train_loop_atomic_property->module~mod_output_files_and_cost
module~mod_train_loop_atomic_property->module~mod_dataloader_file
module~mod_train_loop_short_range
mod_train_loop_short_range
module~mod_train_loop_short_range->module~mod_dataset_storage
module~mod_train_loop_short_range->module~mod_cost_calculator
module~mod_train_loop_short_range->module~mod_cost_epoch
module~mod_train_loop_short_range->module~mod_initialize
module~mod_train_loop_short_range->module~mod_output_files_and_cost
module~mod_train_loop_short_range->module~mod_output_files_and_cost_4g_short_range
module~mod_train_loop_short_range->module~mod_predict_qeq_feature_calculator_multiple_structures
module~mod_train_loop_short_range->module~mod_train_energy_multiple_structures
module~mod_train_loop_short_range->module~mod_train_forces_multiple_structures
module~mod_train_loop_short_range->module~mod_dataloader_file
module~mod_predict_ee4g_feature_calculator_multiple_structures
mod_predict_ee4g_feature_calculator_multiple_structures
module~mod_train_loop_short_range->module~mod_predict_ee4g_feature_calculator_multiple_structures
module~mod_train_mode
mod_train_mode
module~mod_train_mode->module~mod_dataset_storage
module~mod_train_mode->module~mod_cost_epoch
module~mod_train_mode->module~mod_dataset_statistics
module~mod_train_mode->module~mod_initialize
module~mod_train_mode->module~mod_predict_4g_charges_training_qeq_multiple_structures
module~mod_train_mode->module~mod_predict_all_chunks
module~mod_train_mode->module~mod_predict_qeq_feature_calculator_multiple_structures
module~mod_train_mode->module~mod_train_loop_4g_charges
module~mod_train_mode->module~mod_train_loop_atomic_property
module~mod_train_mode->module~mod_train_loop_short_range
module~mod_train_test_split
mod_train_test_split
module~mod_train_mode->module~mod_train_test_split
module~mod_train_mode->module~mod_two_body
module~mod_train_mode->module~mod_write_outfiles_training
module~mod_train_mode->module~mod_dataloader_file
module~mod_dataset_statistics_chi_all_chunks
mod_dataset_statistics_chi_all_chunks
module~mod_train_mode->module~mod_dataset_statistics_chi_all_chunks
module~mod_feature_map_scaling_all_chunks
mod_feature_map_scaling_all_chunks
module~mod_train_mode->module~mod_feature_map_scaling_all_chunks
module~mod_precalc_coulomb_matrix_all_chunks
mod_precalc_coulomb_matrix_all_chunks
module~mod_train_mode->module~mod_precalc_coulomb_matrix_all_chunks
module~mod_precalc_nl_deriv_features_single_chunk
mod_precalc_nl_deriv_features_single_chunk
module~mod_train_mode->module~mod_precalc_nl_deriv_features_single_chunk
module~mod_train_mode->module~mod_predict_ee4g_feature_calculator_multiple_structures
module~mod_train_test_split->module~mod_dataset_storage
module~mod_train_test_split->module~mod_cost_epoch
module~mod_two_body->module~mod_dataset_storage
module~mod_two_body->module~mod_dataloader_file
module~mod_write_outfiles->module~mod_dataset_storage
module~mod_write_outfiles->module~mod_sum_out
module~mod_write_outfiles->module~mod_initialize
module~mod_write_outfiles_training->module~mod_dataset_storage
module~mod_write_outfiles_training->module~mod_cost_epoch
module~mod_write_outfiles_training->module~mod_write_outfiles
module~mod_dataloader_file->module~mod_abstract_structure_data_file
module~mod_dataset_statistics_chi_all_chunks->module~mod_cost_epoch
module~mod_dataset_statistics_chi_all_chunks->module~mod_dataset_statistics
module~mod_dataset_statistics_chi_all_chunks->module~mod_dataloader_file
module~mod_feature_map_scaling_all_chunks->module~mod_cost_epoch
module~mod_feature_map_scaling_all_chunks->module~mod_dataloader_file
module~mod_feature_map_scaling_all_chunks->module~mod_precalc_nl_deriv_features_single_chunk
module~mod_inputdata
mod_inputdata
module~mod_inputdata->module~mod_abstract_structure_data_file
module~mod_precalc_coulomb_matrix_all_chunks->module~mod_predict_4g_charges_training_qeq_multiple_structures
module~mod_precalc_coulomb_matrix_all_chunks->module~mod_dataloader_file
module~mod_precompute_features_all_chunks
mod_precompute_features_all_chunks
module~mod_precompute_features_all_chunks->module~mod_train_test_split
module~mod_precompute_features_all_chunks->module~mod_dataloader_file
module~mod_precompute_global_features_all_chunks
mod_precompute_global_features_all_chunks
module~mod_precompute_global_features_all_chunks->module~mod_predict_qeq_feature_calculator_multiple_structures
module~mod_precompute_global_features_all_chunks->module~mod_dataloader_file
module~mod_precompute_global_features_all_chunks->module~mod_predict_ee4g_feature_calculator_multiple_structures
module~mod_predict_single_structure
mod_predict_single_structure
module~mod_predict_single_structure->module~mod_post_processing_wrapper_single_structure
module~mod_predict_single_structure->module~mod_two_body
module~mod_runner_interface
mod_runner_interface
module~mod_runner_interface->module~mod_two_body
module~mod_runner_interface_bindings
mod_runner_interface_bindings
module~mod_runner_interface_bindings->module~mod_initialize
module~mod_runner_interface_bindings->module~mod_two_body
module~mod_runner_interface_bindings->module~mod_runner_interface
program~runner
RuNNer
program~runner->module~mod_initialize
program~runner->module~mod_predict_mode
program~runner->module~mod_train_mode
program~runner->module~mod_two_body
program~runner->module~mod_dataloader_file
program~runner->module~mod_inputdata
program~runner->module~mod_precompute_features_all_chunks
program~runner->module~mod_precompute_global_features_all_chunks
module~mod_calculate_coulomb_matrix
mod_calculate_coulomb_matrix
program~runner->module~mod_calculate_coulomb_matrix
module~mod_calculate_coulomb_matrix->module~mod_dataloader_file
module~mod_feature_calc_interface
mod_feature_calc_interface
module~mod_feature_calc_interface->module~mod_runner_interface
module~mod_generic_interface
mod_generic_interface
module~mod_feature_calc_interface->module~mod_generic_interface
module~mod_generic_interface->module~mod_predict_single_structure
module~mod_generic_interface->module~mod_runner_interface
module~mod_lammps_interface
mod_lammps_interface
module~mod_lammps_interface->module~mod_runner_interface
module~mod_lammps_interface->module~mod_runner_interface_bindings
module~mod_precalc_nl_deriv_features_single_chunk->module~mod_dataloader_file
module~mod_predict_ee4g_feature_calculator_multiple_structures->module~mod_dataloader_file
module~mod_train_4g_atomic_charges_structure_batch->module~mod_dataloader_file
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Module Variables
IDX_REAL :
integer
IDX_INT :
integer
Derived Types Summary
Name
Description
StorageContainer
Stores a fixed number of integer and real values. This object wraps a single PropertyListInt...
StorageContainerPtr
Generic, polymorphic, wrapper-pointer for all storage container objects.
Procedures Summary
Derived Types Details
type StorageContainer
Stores a fixed number of integer and real values.
This object wraps a single PropertyListInt and PropertyListReal
object. This enables it to store an arbitrary number of integer and real
values for a fixed number of samples.
Components
label :
character
int :
type (PropertyListInt)– Storage container for integer properties.
real :
type (PropertyListReal)– Storage container for real properties.
Type-Bound Procedures
Name
Attributes
Binding
write_to_file
public
⇒ write_to_file_storage_container
Inherits
type~~storagecontainer~~InheritsGraph
type~storagecontainer
StorageContainer
PropertyListInt
PropertyListInt
type~storagecontainer->PropertyListInt
int
PropertyListReal
PropertyListReal
type~storagecontainer->PropertyListReal
real
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Inherited By
type~~storagecontainer~~InheritedByGraph
type~storagecontainer
StorageContainer
type~datasetstorage
DatasetStorage
type~datasetstorage->type~storagecontainer
structure, atom
type~storagecontainerptr
StorageContainerPtr
type~storagecontainerptr->type~storagecontainer
ptr
type~abstractstructuredatafile
AbstractStructureDataFile
type~abstractstructuredatafile->type~datasetstorage
reference_properties
type~sumout
SumOut
type~sumout->type~storagecontainerptr
containers
type~filedataloader
FileDataLoader
type~filedataloader->type~abstractstructuredatafile
data_src
type~inputdata
InputData
type~inputdata->type~abstractstructuredatafile
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type StorageContainerPtr
Generic, polymorphic, wrapper-pointer for all storage container objects.
Components
ptr :
class (StorageContainer )– Gets allocated with an instance of a StorageContainer's child class.
Inherits
type~~storagecontainerptr~~InheritsGraph
type~storagecontainerptr
StorageContainerPtr
type~storagecontainer
StorageContainer
type~storagecontainerptr->type~storagecontainer
ptr
PropertyListInt
PropertyListInt
type~storagecontainer->PropertyListInt
int
PropertyListReal
PropertyListReal
type~storagecontainer->PropertyListReal
real
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Inherited By
type~~storagecontainerptr~~InheritedByGraph
type~storagecontainerptr
StorageContainerPtr
type~sumout
SumOut
type~sumout->type~storagecontainerptr
containers
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Procedure Details
subroutine append_columns_with_tag
subroutine append_columns_with_tag ( & cont, & tag, & dyn_property_indices, & dyn_write_indices, & dyn_types, & dyn_max_ncols, & nrows_tot, & max_ncols, & container_idx, & dyn_parent_obj_indices &)
Helper routine to store information about all properties with a given
tag in a StorageContainer.
Arguments
Called By
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subroutine sort_columns
subroutine sort_columns ( & dyn_property_indices, & dyn_write_indices, & dyn_types, & dyn_max_ncols, & property_indices, & types, & max_ncols, & dyn_parent_obj_indices, & parent_obj_indices &)
Arguments
dyn_property_indices :
type (DynamicIntArray ) [in]
dyn_write_indices :
type (DynamicIntArray ) [in]
dyn_types :
type (DynamicIntArray ) [in]
dyn_max_ncols :
type (DynamicIntArray ) [in]
property_indices :
integer (dim: (:)) [out]
types :
integer (dim: (:)) [out]
max_ncols :
integer (dim: (:)) [out]
dyn_parent_obj_indices :
type (DynamicIntArray ) [in]
parent_obj_indices :
integer (dim: (:)) [out]
Called By
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subroutine write_to_file_storage_container
subroutine write_to_file_storage_container ( & self, & fileunit, & append, & indices &)
Write all contents of a StorageContainer object that have TAG_WRITE
into a file.
Arguments
self :
class (StorageContainer ) [in]
fileunit :
integer [in]
append :
logical [in]– If .false., any existing file will be overwritten.
If .true., no header is printed and an error is thrown if no file
exists.
indices :
integer (dim: (:)) [in]
Called By
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